ProfileXpert

Métagénome/microbiome/virome/fungiome

Cariou M, Henri H, Martinez S, Duret L, Charlat S. How consistent is RAD-seq divergence with DNA-barcode based clustering in insects? Mol Ecol Resour. 2020 Apr 27. doi: 10.1111/1755-0998.13178. [Epub ahead of print] PMID: 32340081 https://www.ncbi.nlm.nih.gov/pubmed/32340081 (RAD-seq, insectes)

Dagnelie MA, Montassier E, Khammari A, Mounier C, Corvec S, Dréno B. Inflammatory skin is associated with changes in the skin microbiota composition on the back of severe acne patients. Exp Dermatol. 2019 Aug;28(8):961-967. doi: 10.1111/exd.13988. Epub 2019 Jul 3. PMID: 31173650. https://www.ncbi.nlm.nih.gov/pubmed/31173650 (RNA 16S, peau, humain)

Sekyere JO, Asante J. Emerging mechanisms of antimicrobial resistance in bacteria and fungi: advances in the era of genomics.  Future Microbiol. 2018 Feb;13:241-262. doi: 10.2217/fmb-2017-0172. Epub 2018 Jan 10. Review. PMID:29319341 https://www.ncbi.nlm.nih.gov/pubmed/29319341  (Génomique et microbiologie)

Minard G, Tran FH, Van VT, Goubert C, Bellet C, Lambert G, Kim KL, Thuy TH, Mavingui P, Valiente Moro C. French invasive Asian tiger mosquito populations harbor reduced bacterial microbiota and genetic diversity compared to Vietnamese autochthonous relatives. Front Microbiol. 2015 Sep 22;6:970. doi: 10.3389/fmicb.2015.00970. eCollection 2015. PMID: 26441903. http://www.ncbi.nlm.nih.gov/pubmed/26441903 (RNA 16S, moustique)

Dupinay T., Pounder KC., Ayral F., Laaberki MH., Marston DA., Lacote S., Rey C., Barbet F., Voller K., Nazaret N., Artois M., Marianneau., Reynes JM., Lachuer J., Fooks AR., Pepin M., Legras-Lachuer C., and LM McElhinney
Detection and Genetic characterization of Seoul virus from commensal brown rats in France (Lyon)
Virol J. 2014 Feb 20;11(1):32. http://www.ncbi.nlm.nih.gov/pubmed/24555484 (Méta-seq)